Basic Information
Locus ID:
Ftri6G09594
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 35545655 | 35549009 | - | Ftri6G09594 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.69 | 77,428.12 Da | 32.18 | 92.70 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 31 | 302 | 7.31904E-90 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 30 | 300 | 9.8E-49 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 426 | 592 | 7.0E-27 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 402 | 669 | 3.78E-44 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 7 | 303 | 2.29E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 397 | 509 | 4.5E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 511 | 685 | 2.5E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 105 | 316 | 1.6E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 3 | 104 | 3.4E-30 | - |
| SMART | SM00220 | serkin_6 | 423 | 682 | 1.6E-9 | IPR000719 |
| SMART | SM00220 | serkin_6 | 25 | 304 | 3.4E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 25 | 305 | 36.089062 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 423 | 686 | 21.644114 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 429 | 461 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 150 | 162 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 31 | 57 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51550.1 | Malectin/receptor-like protein kinase family protein. Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. | 0 |
| RefSeq | XP_021978609.1 | receptor-like kinase LIP2 [Helianthus annuus] | 0 |
| Q9SCZ4 | Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1 | 0 | |
| TrEMBL | A0A251UA42 | Protein kinase domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr08g0237421 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 3 | Ftri10G05819, Ftri10G09137, Ftri6G09594 |