Basic Information
Locus ID:
Ftri6G08778
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
WD repeat-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 66146562 | 66147573 | - | Ftri6G08778 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.59 | 34,212.92 Da | 41.74 | 86.36 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 24 | 250 | 6.33E-28 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 8 | 305 | 1.0E-32 | IPR015943 |
| SMART | SM00320 | WD40_4 | 226 | 304 | 390.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 92 | 134 | 1.2 | IPR001680 |
| SMART | SM00320 | WD40_4 | 137 | 175 | 2.6E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 39 | 80 | 94.0 | IPR001680 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G12910.1 | Transducin/WD40 repeat-like superfamily protein. Encodes a protein with similarity to the petunia WD repeat protein an11. | 0 |
| RefSeq | XP_023740507.1 | WD repeat-containing protein LWD1 [Lactuca sativa] | 0 |
| Q9LPV9 | WD repeat-containing protein LWD1 OS=Arabidopsis thaliana OX=3702 GN=LWD1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2J6MB41 | WD_REPEATS_REGION domain-containing protein OS=Lactuca sativa OX=4236 GN=LSAT_2X95200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology