Basic Information
Locus ID:
Ftri6G03856
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 70346315 | 70349266 | - | Ftri6G03856 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.68 | 48,002.21 Da | 32.03 | 91.53 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 295 | 423 | 5.72849E-28 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 298 | 423 | 5.8E-17 | IPR001229 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 39 | 270 | 2.9E-35 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 38 | 274 | 1.08E-54 | IPR011009 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 283 | 422 | 3.79E-27 | IPR036404 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 88 | 279 | 4.7E-51 | - |
| Gene3D | G3DSA:2.100.10.30 | - | 281 | 425 | 1.5E-36 | IPR036404 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 26 | 87 | 1.8E-12 | - |
| SMART | SM00220 | serkin_6 | 24 | 272 | 3.1E-12 | IPR000719 |
| SMART | SM00915 | Jacalin_2 | 295 | 424 | 2.0E-9 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 283 | 424 | 27.90106 | IPR001229 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 274 | 27.947878 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 129 | 141 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51550.1 | Malectin/receptor-like protein kinase family protein. Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. | 0 |
| RefSeq | XP_021973772.1 | probable receptor-like protein kinase At5g59700 [Helianthus annuus] | 0 |
| Q9SCZ4 | Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1 | 0 | |
| TrEMBL | A0A251UEH0 | Putative jacalin-like lectin domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr07g0201121 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 5 | Ftri17G09392, Ftri17G15571, Ftri17G24526, Ftri6G03856 ... |