Basic Information
Locus ID:
Ftri5G31736
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 7952386 | 7953504 | + | Ftri5G31736 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.13 | 43,149.49 Da | 48.22 | 83.60 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 33 | 68 | 1.4E-4 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 24 | 72 | 3.79E-6 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 33 | 73 | 1.7E-6 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 12 | 26 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_022017667.1 | uncharacterized protein LOC110917415 [Helianthus annuus] | 0 |
| TrEMBL | A0A251S525 | Putative F-box domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr16g0520041 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 1 | pistato.v30052300 |
| Apiaceae | Apium graveolens | 4 | Ag11G04152, Ag11G04154, Ag1G00079, Ag9G02775 |
| Asteraceae | Flaveria trinervia | 3 | Ftri5G07866, Ftri5G20394, Ftri5G31736 |