Basic Information
Locus ID:
Ftri5G28475
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 13146779 | 13150464 | + | Ftri5G28475 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.05 | 94,136.09 Da | 40.14 | 88.76 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 345 | 426 | 1.26666E-21 | - |
| CDD | cd00028 | B_lectin | 32 | 158 | 5.82696E-19 | IPR001480 |
| CDD | cd14066 | STKc_IRAK | 519 | 783 | 2.42435E-92 | - |
| Pfam | PF01453 | D-mannose binding lectin | 73 | 185 | 5.5E-22 | IPR001480 |
| Pfam | PF00069 | Protein kinase domain | 517 | 783 | 3.1E-50 | IPR000719 |
| Pfam | PF00954 | S-locus glycoprotein domain | 220 | 325 | 9.1E-20 | IPR000858 |
| Pfam | PF08276 | PAN-like domain | 349 | 413 | 9.0E-16 | IPR003609 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 74 | 190 | 2.36E-17 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 493 | 784 | 1.35E-84 | IPR011009 |
| Gene3D | G3DSA:3.50.4.10 | Hepatocyte Growth Factor | 345 | 419 | 4.3E-5 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 472 | 588 | 1.7E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 589 | 795 | 7.9E-61 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 25 | 156 | 5.9E-15 | IPR036426 |
| SMART | SM00108 | blect_4 | 29 | 158 | 4.5E-16 | IPR001480 |
| SMART | SM00473 | ntp_6 | 350 | 427 | 5.3E-11 | IPR003609 |
| SMART | SM00220 | serkin_6 | 513 | 790 | 1.5E-40 | IPR000719 |
| PIRSF | PIRSF000641 | SRK | 1 | 832 | 9.1E-246 | IPR024171 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 513 | 790 | 39.876972 | IPR000719 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 349 | 428 | 10.105465 | IPR003609 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 23 | 152 | 14.65291 | IPR001480 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 519 | 541 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 634 | 646 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27290.2 | - | 0 |
| RefSeq | XP_024989253.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Cynara cardunculus var. scolymus] | 0 |
| O81832 | G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana OX=3702 GN=At4g27290 PE=3 SV=4 | 0 | |
| TrEMBL | A0A251S4B6 | Receptor-like serine/threonine-protein kinase OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr16g0517101 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 1 | Ftri5G28475 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132621388 |
| Solanaceae | Solanum chilense | 1 | SOLCI002696000 |
| Solanaceae | Solanum pennellii | 5 | gene-LOC107010092, gene-LOC107010094, gene-LOC107016926 ... |