Basic Information
Locus ID:
Ftri5G28153
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Homocysteine s-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 2666410 | 2668533 | - | Ftri5G28153 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 36,908.48 Da | 30.19 | 95.55 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 29 | 330 | 3.4E-71 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 24 | 333 | 7.06E-78 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 17 | 329 | 1.4E-94 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 15 | 265 | 1.5E-9 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 273 | 336 | 2.4 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 16 | 331 | 47.502781 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25900.1 | Homocysteine S-methyltransferase family protein. | 0 |
| RefSeq | XP_022015430.1 | homocysteine S-methyltransferase 1 [Helianthus annuus] | 0 |
| Q9SDL7 | Homocysteine S-methyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=HMT-1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6NPI3 | Hcy-binding domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_19720 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology