Basic Information
Locus ID:
Ftri5G27873
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 1998883 | 2001786 | + | Ftri5G27873 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.13 | 50,838.53 Da | 35.62 | 93.70 | 0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 339 | 410 | 2.3E-19 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 24 | 321 | 4.7E-66 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 24 | 322 | 3.44E-72 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 332 | 426 | 1.0E-9 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 22 | 328 | 3.1E-95 | - |
| SMART | SM00768 | X8_cls | 338 | 423 | 5.4E-50 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 236 | 249 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01630.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_021998568.1 | glucan endo-1,3-beta-glucosidase 3 isoform X2 [Helianthus annuus] | 0 |
| Q9ZU91 | Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 PE=2 SV=2 | 0 | |
| TrEMBL | A0A251T7A4 | Putative O-Glycosyl hydrolases family 17 protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr12g0377781 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology