HalophFGD

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Basic Information
Locus ID: Ftri5G23007
Species & Taxonomic ID: Flaveria trinervia & 4227
Genome Assembly: GCA_025506515.1
Description: Protein FAR1-RELATED SEQUENCE 5-like
Maps and Mapping Data
Chromosome Start End Strand ID
chr5 14690017 14692395 - Ftri5G23007
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.51 54,458.93 Da 41.02 80.36 -0.22
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF10551 MULE transposase domain 96 189 9.9E-25 IPR018289
SMART SM00575 26again6 381 408 0.002 IPR006564
ProSiteProfiles PS50966 Zinc finger SWIM-type profile. 370 406 9.532228 IPR007527
Gene Ontology
Molecular Function:
GO:0008270 (zinc ion binding)
KEGG Pathway
KO Term:
K17604 (zinc finger SWIM domain-containing protein 3)
Best hit
Source Best Hit ID Description E-value
TAIR AT4G38180.1 FAR1-related sequence 5. 0
RefSeq XP_021977765.2 protein FAR1-RELATED SEQUENCE 5-like [Helianthus annuus] 0
Swiss-Prot Q9SZL8 Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1 0
TrEMBL A0A5N6PZ54 Protein FAR1-RELATED SEQUENCE OS=Mikania micrantha OX=192012 GN=E3N88_00539 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Asteraceae Flaveria trinervia 44 Ftri10G11617, Ftri10G29163, Ftri11G07361, Ftri11G18246 ...
Ftri11G28932, Ftri12G02740, Ftri12G23135, Ftri12G30949, Ftri12G31882, Ftri13G00300, Ftri13G02788, Ftri13G14475, Ftri14G08431, Ftri14G17396, Ftri14G24276, Ftri15G17861, Ftri15G23176, Ftri15G26300, Ftri16G02063, Ftri16G05055, Ftri16G11082, Ftri16G11904, Ftri16G22178, Ftri16G22966, Ftri16G29932, Ftri16G32504, Ftri17G07867, Ftri2G01229, Ftri3G05569, Ftri4G07590, Ftri4G10090, Ftri4G15855, Ftri4G18820, Ftri5G06459, Ftri5G23007, Ftri6G19831, Ftri7G15215, Ftri7G18898, Ftri7G21702, Ftri8G00461, Ftri8G00988, FtriNA13922, FtriNA22465, FtriNA26942
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.