Basic Information
Locus ID:
Ftri5G21946
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 843789 | 850717 | - | Ftri5G21946 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.52 | 68,951.25 Da | 39.21 | 100.38 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 304 | 575 | 5.8E-43 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 70 | 1.1E-11 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 278 | 578 | 2.73E-76 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 31 | 197 | 1.46E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 213 | 2.2E-52 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 272 | 379 | 3.1E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 380 | 594 | 1.2E-62 | - |
| SMART | SM00220 | serkin_6 | 303 | 577 | 1.3E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 303 | 583 | 35.467167 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 426 | 438 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 309 | 331 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60800.1 | NSP-interacting kinase 3. | 0 |
| RefSeq | XP_035836397.1 | protein NSP-INTERACTING KINASE 3 isoform X6 [Helianthus annuus] | 0 |
| Q93ZS4 | Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana OX=3702 GN=NIK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251T6D6 | Protein kinase domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr12g0384291 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology