Basic Information
Locus ID:
Ftri5G16465
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 10022654 | 10025704 | - | Ftri5G16465 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.66 | 63,320.45 Da | 34.03 | 90.51 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 28 | 189 | 7.35476E-91 | - |
| CDD | cd02005 | TPP_PDC_IPDC | 387 | 569 | 1.24882E-90 | - |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 24 | 191 | 8.4E-35 | IPR012001 |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 222 | 339 | 5.1E-23 | IPR012000 |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 432 | 557 | 1.7E-15 | IPR011766 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 24 | 198 | 1.52E-40 | IPR029061 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 217 | 364 | 4.8E-34 | IPR029035 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 387 | 581 | 1.16E-42 | IPR029061 |
| Gene3D | G3DSA:3.40.50.1220 | - | 212 | 374 | 6.4E-44 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 381 | 568 | 1.9E-57 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 21 | 197 | 1.3E-60 | - |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 19 | 581 | 4.4E-208 | IPR012110 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G54960.1 | pyruvate decarboxylase-2. pyruvate decarboxylase-2 | 0 |
| RefSeq | XP_022012950.1 | pyruvate decarboxylase 1 [Helianthus annuus] | 0 |
| P51850 | Pyruvate decarboxylase 1 OS=Pisum sativum OX=3888 GN=PDC1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A251SBK9 | pyruvate decarboxylase OS=Helianthus annuus OX=4232 GN=PDC1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology