Basic Information
Locus ID:
Ftri5G14906
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Ankyrin repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 6359218 | 6363512 | - | Ftri5G14906 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.02 | 46,990.04 Da | 38.70 | 85.32 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 143 | 395 | 3.94364E-99 | - |
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 31 | 119 | 5.1E-13 | IPR020683 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 146 | 395 | 2.3E-55 | IPR001245 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 18 | 124 | 3.89E-24 | IPR036770 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 146 | 396 | 3.37E-71 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 218 | 408 | 3.7E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 135 | 217 | 2.8E-21 | - |
| Gene3D | G3DSA:1.25.40.20 | - | 8 | 134 | 2.2E-25 | IPR036770 |
| SMART | SM00248 | ANK_2a | 57 | 86 | 2.5E-6 | IPR002110 |
| SMART | SM00248 | ANK_2a | 90 | 120 | 27.0 | IPR002110 |
| PIRSF | PIRSF000654 | ILK | 2 | 407 | 2.0E-119 | - |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 57 | 89 | 12.461023 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 138 | 399 | 40.597809 | IPR000719 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 57 | 89 | 13.83795 | IPR002110 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 321 | 343 | 9.8E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 366 | 388 | 9.8E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 252 | 270 | 9.8E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 213 | 226 | 9.8E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G18950.2 | - | 0 |
| RefSeq | XP_042757777.1 | integrin-linked protein kinase 1 isoform X6 [Lactuca sativa] | 0 |
| Q93Z30 | Serine/threonine-protein kinase 12 OS=Arabidopsis thaliana OX=3702 GN=BHP PE=1 SV=1 | 0 | |
| TrEMBL | A0A2J6KM81 | Protein kinase domain-containing protein OS=Lactuca sativa OX=4236 GN=LSAT_4X36180 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg29348 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30010930 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_04.1310.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri5G14906 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-6135, nbisL1-mrna-9505 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00016722 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_9_RagTag.488 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-21756 |
| Rhizophoraceae | Ceriops zippeliana | 3 | nbisL1-mrna-7321, nbisL1-mrna-7322, nbisL1-mrna-7323 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000003l.269 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00017523 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-19640 |
| Salicaceae | Populus euphratica | 1 | populus_peu31675 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132610332 |
| Solanaceae | Solanum chilense | 1 | SOLCI005577300 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107032428 |