Basic Information
Locus ID:
Ftri5G05431
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 3383600 | 3388335 | + | Ftri5G05431 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.00 | 90,638.09 Da | 40.49 | 79.55 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 96 | 292 | 1.42702E-102 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 110 | 270 | 1.6E-12 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 274 | 771 | 1.0E-192 | IPR001404 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 95 | 302 | 5.24E-60 | IPR036890 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 345 | 603 | 6.6E-90 | IPR020568 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 625 | 746 | 8.76E-33 | IPR037196 |
| Gene3D | G3DSA:3.40.50.11260 | - | 516 | 602 | 4.2E-32 | - |
| Gene3D | G3DSA:3.30.230.80 | - | 343 | 515 | 4.0E-74 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 72 | 317 | 5.0E-89 | IPR036890 |
| Gene3D | G3DSA:1.20.120.790 | - | 603 | 750 | 2.3E-51 | IPR037196 |
| SMART | SM00387 | HKATPase_4 | 109 | 271 | 5.5E-7 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 65 | 790 | 1.7E-239 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 107 | 116 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 278 | 296 | 1.1E-56 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 259 | 276 | 1.1E-56 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 175 | 192 | 1.1E-56 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 204 | 226 | 1.1E-56 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 157 | 174 | 1.1E-56 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 108 | 130 | 1.1E-56 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 87 | 107 | 1.1E-56 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 76 | 747 | 25.949686 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 759 | 800 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 305 | 329 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 764 | 784 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G04030.1 | Chaperone protein htpG family protein. Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. | 0 |
| RefSeq | XP_022015301.1 | heat shock protein 90-5, chloroplastic [Helianthus annuus] | 0 |
| Q9SIF2 | Heat shock protein 90-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP90-5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251S3K3 | Putative heat shock protein Hsp90 family, DNA mismatch repair protein family OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr16g0528551 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology