Basic Information
Locus ID:
Ftri5G03186
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
F-box FBD LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 6747150 | 6755289 | - | Ftri5G03186 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.53 | 38,853.64 Da | 61.75 | 103.29 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 27 | 65 | 6.5E-9 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 22 | 77 | 2.35E-13 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 145 | 323 | 3.02E-6 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 25 | 70 | 1.5E-9 | - |
| SMART | SM00256 | fbox_2 | 31 | 71 | 6.2E-7 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 25 | 73 | 10.451268 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G49030.2 | FBD, F-box and Leucine Rich Repeat domains containing protein. | 0 |
| RefSeq | XP_022017160.1 | F-box protein At5g03100-like [Helianthus annuus] | 0 |
| Q9SMU0 | Putative F-box/FBD/LRR-repeat protein At3g49030 OS=Arabidopsis thaliana OX=3702 GN=At3g49030 PE=4 SV=1 | 0 | |
| TrEMBL | A0A251S117 | Putative F-box domain, Leucine-rich repeat domain, L domain-like protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr16g0521231 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 2 | Ftri5G03186, Ftri5G07668 |