Basic Information
Locus ID:
Ftri4G30777
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 17045530 | 17049005 | - | Ftri4G30777 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.61 | 105,199.61 Da | 34.78 | 103.55 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 499 | 517 | 0.07 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 454 | 474 | 1.0 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 17 | 57 | 1.2E-8 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 660 | 927 | 3.2E-47 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 654 | 930 | 3.28E-72 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 265 | 577 | 6.01E-57 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 16 | 263 | 3.97E-51 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 16 | 166 | 2.7E-36 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 167 | 264 | 2.0E-29 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 641 | 734 | 1.0E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 265 | 578 | 6.9E-89 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 735 | 944 | 5.8E-59 | - |
| SMART | SM00369 | LRR_typ_2 | 180 | 204 | 8.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 308 | 332 | 58.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 404 | 428 | 28.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 658 | 930 | 7.5E-35 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 452 | 475 | 79.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 107 | 131 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 529 | 552 | 240.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 658 | 941 | 38.94413 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 406 | 428 | 7.072797 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 781 | 793 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 664 | 686 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_022000469.1 | leucine-rich repeat receptor-like protein kinase PXL1 [Helianthus annuus] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251SRJ9 | Putative leucine-rich receptor-like protein kinase family protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr13g0396581 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology