Basic Information
Locus ID:
Ftri4G22229
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 83151587 | 83153928 | + | Ftri4G22229 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.88 | 70,335.98 Da | 32.70 | 94.45 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 28 | 266 | 2.0E-39 | IPR000719 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 410 | 515 | 7.5E-14 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 16 | 282 | 1.19E-67 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 372 | 610 | 5.19E-38 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 103 | 292 | 7.9E-50 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 444 | 516 | 2.8E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 517 | 619 | 4.1E-17 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 372 | 443 | 6.7E-6 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 102 | 3.8E-27 | - |
| SMART | SM00220 | serkin_6 | 24 | 275 | 2.3E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 24 | 275 | 33.120922 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 366 | 607 | 18.068213 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 30 | 55 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 146 | 158 | - | IPR008271 |
| Coils | Coil | Coil | 1 | 21 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51740.1 | inflorescence meristem receptor-like kinase 2. encodes a leucine-repeat receptor kinase expressed in inflorescence meristem. Locus association was made from performing sequence analysis with IMK3 (MRLK) whose locus association was provided by the authors. | 0 |
| RefSeq | XP_021989553.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g11303 [Helianthus annuus] | 0 |
| C0LGP9 | Probable leucine-rich repeat receptor-like protein kinase IMK3 OS=Arabidopsis thaliana OX=3702 GN=IMK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251TNS4 | Putative mitogen-activated protein (MAP) kinase kinase kinase 10 OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr10g0307731 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 30 | Ftri11G25505, Ftri12G15517, Ftri14G01992, Ftri14G04619 ... |