Basic Information
Locus ID:
Ftri4G21074
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 83114241 | 83118664 | - | Ftri4G21074 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 68,577.89 Da | 32.39 | 99.84 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 301 | 567 | 3.6E-42 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 70 | 6.3E-14 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 98 | 157 | 1.0E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 282 | 570 | 1.91E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 31 | 195 | 9.72E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 377 | 587 | 2.1E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 212 | 1.0E-52 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 273 | 376 | 3.1E-34 | - |
| SMART | SM00220 | serkin_6 | 300 | 569 | 4.2E-32 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 122 | 144 | 7.357723 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 300 | 579 | 36.060795 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 306 | 328 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 419 | 431 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 123 | 136 | 3.5E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 168 | 181 | 3.5E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G30520.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021989559.1 | probable LRR receptor-like serine/threonine-protein kinase At4g30520 [Helianthus annuus] | 0 |
| Q8VYT3 | Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidopsis thaliana OX=3702 GN=At4g30520 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251TMF9 | Putative leucine-rich repeat protein kinase family protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr10g0307821 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology