halophFGD

Basic Information

Locus ID: Ftri4G16894

Species & Taxonomic ID: Flaveria trinervia & 4227

Genome Assembly: GCA_025506515.1

Short Name: DRM3

Description: DNA (cytosine-5-)-methyltransferase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr4	30621866	30632493	+	Ftri4G16894

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.46	84,381.39 Da	47.66	82.41	-0.32

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases	626	714	7.23E-5	IPR029063
SUPERFAMILY	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases	425	611	3.16E-6	IPR029063
Gene3D	G3DSA:3.40.50.150	Vaccinia Virus protein VP39	620	755	5.8E-13	-
ProSiteProfiles	PS51680	SAM-dependent methyltransferase DRM-type domain profile.	422	755	109.719604	IPR030380
MobiDBLite	mobidb-lite	consensus disorder prediction	104	128	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	109	128	-	-
Coils	Coil	Coil	215	235	-	-

Gene Ontology

Molecular Function:

GO:0009008 (DNA-methyltransferase activity)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G17310.1	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.
RefSeq	XP_021984615.1	probable inactive DNA (cytosine-5)-methyltransferase DRM3 isoform X2 [Helianthus annuus]
Swiss-Prot	Q8H1E8	Probable inactive DNA (cytosine-5)-methyltransferase DRM3 OS=Arabidopsis thaliana OX=3702 GN=DRM3 PE=1 SV=1
TrEMBL	A0A5N6P109	SAM-dependent MTase DRM-type domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_14269 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	3	jg12329, jg19846, jg40383
Aizoaceae	Mesembryanthemum crystallinum	4	gene_2751, gene_3629, gene_6994, gene_9482
Amaranthaceae	Atriplex hortensis	3	Ah013583, Ah019957, Ah033021
Amaranthaceae	Beta vulgaris	3	BVRB_2g039700, BVRB_3g059670, BVRB_6g148640
Amaranthaceae	Salicornia bigelovii	7	Sbi_jg29672, Sbi_jg38188, Sbi_jg42911, Sbi_jg43192 ... Sbi_jg43200, Sbi_jg45520, Sbi_jg6319
Amaranthaceae	Salicornia europaea	3	Seu_jg11369, Seu_jg15539, Seu_jg18697
Amaranthaceae	Suaeda aralocaspica	3	GOSA_00002436, GOSA_00003647, GOSA_00006074
Amaranthaceae	Suaeda glauca	6	Sgl01604, Sgl06769, Sgl35331, Sgl40686, Sgl44530, Sgl49297
Amaranthaceae	Chenopodium album	10	gene:ENSEOMG00000012495, gene:ENSEOMG00000012797 ... gene:ENSEOMG00000013315, gene:ENSEOMG00000014660, gene:ENSEOMG00000016466, gene:ENSEOMG00000019236, gene:ENSEOMG00000024693, gene:ENSEOMG00000029808, gene:ENSEOMG00000045243, gene:ENSEOMG00000048220
Amaranthaceae	Chenopodium quinoa	5	CQ.Regalona.r1.2AG0007410, CQ.Regalona.r1.2BG0008710 ... CQ.Regalona.r1.3AG0012710, CQ.Regalona.r1.3BG0012800, CQ.Regalona.r1.6BG0005370
Anacardiaceae	Pistacia vera	4	pistato.v30022640, pistato.v30074120, pistato.v30232130 ... pistato.v30232480
Apiaceae	Apium graveolens	4	Ag3G00862, Ag4G00774, Ag6G00321, Ag9G01942
Arecaceae	Cocos nucifera	2	COCNU_01G002290, COCNU_04G011460
Arecaceae	Phoenix dactylifera	6	gene-LOC103700939, gene-LOC103724025, gene-LOC120104069 ... gene-LOC120104399, gene-LOC120105409, gene-LOC120105463
Asparagaceae	Asparagus officinalis	4	AsparagusV1_02.2232.V1.1, AsparagusV1_04.911.V1.1 ... AsparagusV1_04.912.V1.1, AsparagusV1_07.1124.V1.1
Asteraceae	Flaveria trinervia	4	Ftri13G07661, Ftri18G13410, Ftri4G16894, FtriNA11408
Brassicaceae	Arabidopsis thaliana	3	AT3G17310.2, AT5G14620.1, AT5G15380.1
Brassicaceae	Eutrema salsugineum	5	Thhalv10000125m.g.v1.0, Thhalv10013122m.g.v1.0 ... Thhalv10019614m.g.v1.0, Thhalv10020166m.g.v1.0, Thhalv10022170m.g.v1.0
Brassicaceae	Schrenkiella parvula	3	Sp3g15500.v2.2, Sp5g24600.v2.2, Sp6g29410.v2.2
Brassicaceae	Brassica nigra	5	BniB01g022770.2N, BniB01g047440.2N, BniB02g048150.2N ... BniB03g046880.2N, BniB05g023910.2N
Casuarinaceae	Casuarina equisetifolia	3	Ceq02G1845, Ceq02G1846, Ceq02G1847
Casuarinaceae	Casuarina glauca	2	Cgl02G1927, Cgl09G1495
Cymodoceaceae	Cymodocea nodosa	3	gene.Cymno10g05640, gene.Cymno13g04920, gene.Cymno15g01190
Dunaliellaceae	Dunaliella salina	1	Dusal.0682s00003.v1.0
Hydrocharitaceae	Thalassia testudinum	4	gene.Thate02g01630, gene.Thate02g22240, gene.Thate02g36290 ... gene.Thate05g00710
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-7315
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG05.349, evm.TU.LG11.1129
Plantaginaceae	Plantago ovata	7	Pov_00017436, Pov_00023284, Pov_00023439, Pov_00023440 ... Pov_00026326, Pov_00033128, Pov_00033130
Plumbaginaceae	Limonium bicolor	2	Lb1G04321, Lb5G28748
Poaceae	Echinochloa crus-galli	16	AH01.4544, AH01.5042, AH02.1928, AH02.3380, AH05.853 ... BH01.4332, BH01.5177, BH02.1980, BH02.3591, CH01.5160, CH02.2140, CH02.3122, CH05.1069, Contig1042.21, Contig192.186, Contig2087.2
Poaceae	Eleusine coracana subsp. coracana	5	gene-QOZ80_3AG0230760, gene-QOZ80_3BG0297100 ... gene-QOZ80_5AG0406120, gene-QOZ80_5BG0454200, gene-QOZ80_6AG0509130
Poaceae	Hordeum vulgare	11	HORVU.MOREX.r3.3HG0314510.1, HORVU.MOREX.r3.3HG0314530.1 ... HORVU.MOREX.r3.4HG0417570.1, HORVU.MOREX.r3.4HG0417580.1, HORVU.MOREX.r3.5HG0430740.1, HORVU.MOREX.r3.5HG0486930.1, HORVU.MOREX.r3.6HG0560940.1.CDS1, HORVU.MOREX.r3.6HG0571740.1, HORVU.MOREX.r3.6HG0571750.1, HORVU.MOREX.r3.6HG0620600.1, HORVU.MOREX.r3.7HG0634770.1
Poaceae	Lolium multiflorum	20	gene-QYE76_000669, gene-QYE76_000724, gene-QYE76_000726 ... gene-QYE76_005707, gene-QYE76_005825, gene-QYE76_009307, gene-QYE76_011769, gene-QYE76_020475, gene-QYE76_020551, gene-QYE76_027550, gene-QYE76_027609, gene-QYE76_029289, gene-QYE76_035237, gene-QYE76_035464, gene-QYE76_036497, gene-QYE76_039439, gene-QYE76_039638, gene-QYE76_039647, gene-QYE76_048568, gene-QYE76_067281
Poaceae	Oryza coarctata	5	Oco05G000630, Oco06G000610, Oco09G001630, Oco10G001690 ... Ocoptg000061lG000400
Poaceae	Oryza sativa	4	LOC_Os03g02010.4, LOC_Os05g04330.1, LOC_Os11g01810.1 ... LOC_Os12g01800.1
Poaceae	Paspalum vaginatum	3	gene-BS78_01G105200, gene-BS78_01G510300 ... gene-BS78_09G032100
Poaceae	Puccinellia tenuiflora	9	Pt_Chr0100858, Pt_Chr0200475, Pt_Chr0205861, Pt_Chr0403651 ... Pt_Chr0500423, Pt_Chr0502736, Pt_Chr0502793, Pt_Chr0701860, Pt_Chr0704307
Poaceae	Sporobolus alterniflorus	8	Chr01G012980, Chr04G006720, Chr07G004930, Chr10G011960 ... Chr11G010320, Chr11G022810, Chr12G000420, Chr12G023790
Poaceae	Thinopyrum elongatum	18	Tel3E01G124800, Tel3E01G731400, Tel3E01G731500 ... Tel3E01G731600, Tel3E01G731900, Tel3E01G732000, Tel3E01G732400, Tel3E01G732500, Tel4E01G627600, Tel4E01G627800, Tel4E01G627900, Tel4E01G633700, Tel5E01G114500, Tel5E01G390100, Tel6E01G270200, Tel6E01G322800, Tel6E01G599500, Tel7E01G015900
Poaceae	Triticum dicoccoides	25	gene_TRIDC3AG065110, gene_TRIDC3AG065120 ... gene_TRIDC3AG065140, gene_TRIDC3BG073800, gene_TRIDC3BG073820, gene_TRIDC3BG073850, gene_TRIDC4AG041740, gene_TRIDC4AG071160, gene_TRIDC4BG007310, gene_TRIDC4BG056130, gene_TRIDC4BG063290, gene_TRIDC4BG063360, gene_TRIDC5AG007930, gene_TRIDC5AG038150, gene_TRIDC5AG078000, gene_TRIDC5BG009510, gene_TRIDC5BG040090, gene_TRIDC6AG016560, gene_TRIDC6AG023110, gene_TRIDC6AG050760, gene_TRIDC6BG014730, gene_TRIDC6BG022180, gene_TRIDC6BG028060, gene_TRIDC6BG059370, gene_TRIDC7AG000500
Poaceae	Triticum aestivum	38	TraesCS3A02G067600.1, TraesCS3A02G461200.1 ... TraesCS3A02G461300.1, TraesCS3A02G461500.1, TraesCS3B02G503900.1, TraesCS3B02G504000.1, TraesCS3B02G504200.1, TraesCS3D02G454900.1, TraesCS4A02G267400.1, TraesCS4A02G495700.1, TraesCS4B02G012300.2, TraesCS4B02G047000.1, TraesCS4B02G334900.1, TraesCS4B02G388300.1, TraesCS4B02G388900.2, TraesCS4B02G390500.4, TraesCS4D02G046800.1, TraesCS5A02G051400.2, TraesCS5A02G241800.1, TraesCS5A02G553300.3, TraesCS5B02G057300.1, TraesCS5B02G239800.1, TraesCS5D02G062400.2, TraesCS5D02G248300.1, TraesCS6A02G124200.1.cds1, TraesCS6A02G163300.1, TraesCS6A02G338800.1, TraesCS6B02G107600.1, TraesCS6B02G186600.1, TraesCS6B02G369700.1, TraesCS6D02G147500.2, TraesCS6D02G319500.2, TraesCS7A02G002900.3, TraesCS7D02G003200.1, TraesCSU02G124200.1, TraesCSU02G140500.1, TraesCSU02G140600.1, TraesCSU02G224900.1.cds1
Poaceae	Zea mays	3	Zm00001eb000820_P001, Zm00001eb354730_P003 ... Zm00001eb404130_P003
Poaceae	Zoysia japonica	5	nbis-gene-18266, nbis-gene-3184, nbis-gene-40419 ... nbis-gene-46476, nbis-gene-4763
Poaceae	Zoysia macrostachya	3	Zma_g2263, Zma_g27650, Zma_g29119
Portulacaceae	Portulaca oleracea	7	evm.TU.LG04.1153, evm.TU.LG04.2630, evm.TU.LG04.764 ... evm.TU.LG05.1695, evm.TU.LG05.2169, evm.TU.LG08.223, evm.TU.LG13.186
Posidoniaceae	Posidonia oceanica	2	gene.Posoc06g21410, gene.Posoc10g09930
Rhizophoraceae	Bruguiera sexangula	2	evm.TU.Scaffold_3_RagTag.1913, evm.TU.Scaffold_6_RagTag.1232
Rhizophoraceae	Carallia pectinifolia	3	nbisL1-mrna-16216, nbisL1-mrna-2388, nbisL1-mrna-2584
Rhizophoraceae	Ceriops tagal	2	nbisL1-mrna-10374, nbisL1-mrna-6764
Rhizophoraceae	Ceriops zippeliana	2	nbisL1-mrna-1063, nbisL1-mrna-3082
Rhizophoraceae	Kandelia candel	1	evm.TU.utg000011l.792
Rhizophoraceae	Kandelia obovata	2	Maker00001762, Maker00007153
Rhizophoraceae	Rhizophora apiculata	2	nbisL1-mrna-12041, nbisL1-mrna-13508
Rhizophoraceae	Rhizophora mangle	1	nbisL1-mrna-4014
Salicaceae	Populus euphratica	2	populus_peu01063, populus_peu20743
Solanaceae	Lycium barbarum	4	gene-LOC132607592, gene-LOC132615999, gene-LOC132625913 ... gene-LOC132640316
Solanaceae	Solanum chilense	4	SOLCI000567400, SOLCI000706100, SOLCI002770400 ... SOLCI004658700
Solanaceae	Solanum pennellii	4	gene-LOC107011109, gene-LOC107016107, gene-LOC107018577 ... gene-LOC107032235
Tamaricaceae	Reaumuria soongarica	4	gene_1238, gene_1327, gene_14703, gene_1617
Tamaricaceae	Tamarix chinensis	2	TC01G3601, TC12G1720
Zosteraceae	Zostera marina	2	Zosma04g05100.v3.1, Zosma06g14000.v3.1