Basic Information
Locus ID:
Ftri4G12678
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Domain of unknown function (DUF3444)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 7187984 | 7189891 | - | Ftri4G12678 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.05 | 72,102.75 Da | 44.48 | 65.43 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 66 | 119 | 3.07319E-18 | IPR001623 |
| Pfam | PF11926 | Domain of unknown function (DUF3444) | 394 | 601 | 9.0E-71 | IPR024593 |
| Pfam | PF00226 | DnaJ domain | 66 | 127 | 1.7E-18 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 54 | 126 | 1.06E-20 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 54 | 139 | 3.5E-20 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 65 | 122 | 5.8E-21 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 66 | 130 | 16.416855 | IPR001623 |
| ProSitePatterns | PS00636 | Nt-dnaJ domain signature. | 107 | 126 | - | IPR018253 |
| PRINTS | PR00625 | DnaJ domain signature | 102 | 122 | 5.9E-11 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 86 | 101 | 5.9E-11 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 68 | 86 | 5.9E-11 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 228 | 255 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 225 | 258 | - | - |
| Coils | Coil | Coil | 269 | 289 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G53150.2 | - | 0 |
| RefSeq | XP_035837465.1 | uncharacterized protein LOC118485446 [Helianthus annuus] | 0 |
| Q9RUG2 | Chaperone protein DnaJ OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1) OX=243230 GN=dnaJ PE=3 SV=2 | 0 | |
| TrEMBL | A0A5N6LL53 | J domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_39922 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology