Basic Information
Locus ID:
Ftri4G00613
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 83981376 | 83984844 | - | Ftri4G00613 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 66,621.44 Da | 46.82 | 106.75 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 510 | 531 | 0.18 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 536 | 556 | 0.011 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 193 | 216 | 0.0013 | IPR001611 |
| SUPERFAMILY | SSF81383 | F-box domain | 50 | 93 | 1.83E-6 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 145 | 390 | 1.65E-32 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 278 | 615 | 3.4E-31 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 233 | 423 | 3.3E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 117 | 232 | 3.0E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 424 | 618 | 5.4E-32 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 560 | 588 | 380.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 245 | 270 | 8.7E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 534 | 558 | 11.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 428 | 453 | 0.91 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 193 | 218 | 3.1E-6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 377 | 402 | 190.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 454 | 479 | 1.5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 351 | 376 | 400.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 325 | 350 | 0.22 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 219 | 244 | 9.7E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 481 | 506 | 63.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 167 | 192 | 1.1 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 508 | 533 | 3.4E-4 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_021996686.1 | EIN3-binding F-box protein 2 isoform X1 [Helianthus annuus] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251SYE4 | Putative F-box domain, Leucine-rich repeat domain, L domain-like protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr12g0356231 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology