Basic Information
Locus ID:
Ftri3G32009
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
phosphatase 2A 55 kDa regulatory subunit B
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 81322838 | 81328197 | - | Ftri3G32009 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 53,794.96 Da | 36.30 | 74.68 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 227 | 263 | 0.12 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 35 | 423 | 1.42E-25 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 29 | 466 | 1.7E-18 | IPR015943 |
| SMART | SM00320 | WD40_4 | 27 | 62 | 3.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 274 | 314 | 10.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 224 | 263 | 1.2 | IPR001680 |
| PIRSF | PIRSF037309 | PPA2_B55 | 6 | 443 | 5.2E-154 | IPR000009 |
| ProSitePatterns | PS01025 | Protein phosphatase 2A regulatory subunit PR55 signature 2. | 233 | 247 | - | IPR018067 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 263 | 290 | 4.6E-109 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 320 | 347 | 4.6E-109 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 348 | 375 | 4.6E-109 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 402 | 428 | 4.6E-109 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 376 | 401 | 4.6E-109 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 235 | 262 | 4.6E-109 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 41 | 61 | 4.6E-109 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 291 | 319 | 4.6E-109 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 88 | 116 | 4.6E-109 | IPR000009 |
Gene Ontology
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04111 (Cell cycle - yeast)
map04111 (Cell cycle - yeast)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04391 (Hippo signaling pathway - fly)
map04391 (Hippo signaling pathway - fly)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G51690.2 | protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform. 55 kDa B regulatory subunit of phosphatase 2A mRNA, | 0 |
| RefSeq | XP_021969974.1 | serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform [Helianthus annuus] | 0 |
| Q38821 | Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Arabidopsis thaliana OX=3702 GN=PP2AB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5N6NU87 | Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B OS=Mikania micrantha OX=192012 GN=E3N88_17223 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology