Basic Information
Locus ID:
Ftri3G31700
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 81962341 | 81965802 | + | Ftri3G31700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.93 | 76,398.41 Da | 55.48 | 80.46 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 5 | 153 | 1.66681E-51 | - |
| Pfam | PF00582 | Universal stress protein family | 3 | 125 | 8.2E-6 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 394 | 628 | 1.7E-42 | IPR000719 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 1 | 128 | 8.37E-7 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 369 | 648 | 3.96E-70 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 363 | 465 | 1.1E-25 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 3 | 150 | 2.2E-8 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 466 | 672 | 1.8E-50 | - |
| SMART | SM00220 | serkin_6 | 393 | 653 | 2.7E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 393 | 656 | 35.45303 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 511 | 523 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 202 | 222 | - | - |
| Coils | Coil | Coil | 292 | 312 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_021969953.1 | U-box domain-containing protein 52 [Helianthus annuus] | 0 |
| Q9FKG5 | U-box domain-containing protein 51 OS=Arabidopsis thaliana OX=3702 GN=PUB51 PE=2 SV=2 | 0 | |
| TrEMBL | A0A251UH21 | Protein kinase domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr06g0173601 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology