Basic Information
Locus ID:
Ftri3G31050
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
bHLH-MYC and R2R3-MYB transcription factors N-terminal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 86235906 | 86237760 | + | Ftri3G31050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 65,649.69 Da | 33.31 | 71.04 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd11449 | bHLH_AtAIB_like | 413 | 489 | 1.83119E-45 | - |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 420 | 465 | 4.3E-10 | IPR011598 |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 65 | 235 | 1.4E-41 | IPR025610 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 419 | 487 | 1.7E-17 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 408 | 494 | 7.2E-17 | IPR036638 |
| SMART | SM00353 | finulus | 422 | 471 | 3.2E-15 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 416 | 465 | 16.843782 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 383 | 427 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 281 | 304 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 319 | 366 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 396 | 427 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 319 | 341 | - | - |
| Coils | Coil | Coil | 462 | 489 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G32640.1 | Basic helix-loop-helix (bHLH) DNA-binding family protein. Encodes a MYC-related transcriptional activator with a typical DNA binding domain of a basic helix-loop-helix leucine zipper motif. Binds to an extended G-Box promoter motif. Its transcription is induced by dehydration stress and ABA treatment. Negative regulator of blue lightmediated photomorphogenic growth and blue and far-red-lightregulated gene expression. Positive regulator of lateral root formation. Regulates diverse JA-dependent functions. Negatively regulates Trp metabolism and biosynthesis of Trp-derived secondary metabolites. Positively regulates flavonoid biosynthesis, resistance to insects, and response to oxidative stress. Regulates other transcription factors, and negatively regulates its own expression. | 0 |
| RefSeq | XP_023736226.1 | transcription factor MYC2 [Lactuca sativa] | 0 |
| A0A3Q7HRZ6 | Transcription factor MYC2 OS=Solanum lycopersicum OX=4081 GN=MYC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0M4JJA3 | Transcription factor MYC2 OS=Cichorium intybus OX=13427 GN=MYC2 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology