Basic Information
Locus ID:
Ftri3G30941
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 70420062 | 70434728 | + | Ftri3G30941 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.80 | 113,680.27 Da | 32.56 | 102.90 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 828 | 1013 | 1.1E-35 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 65 | 1.7E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 589 | 649 | 2.3E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 140 | 200 | 3.5E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 426 | 728 | 3.74E-54 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 58 | 345 | 4.94E-52 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 324 | 421 | 3.4E-8 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 816 | 1018 | 4.78E-54 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 141 | 3.4E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 461 | 589 | 5.2E-35 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 590 | 756 | 7.1E-42 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 812 | 1021 | 1.9E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 203 | 460 | 1.6E-67 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 142 | 202 | 1.0E-16 | IPR032675 |
| SMART | SM00220 | serkin_6 | 826 | 1020 | 1.2E-9 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 163 | 187 | 81.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 307 | 331 | 69.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 446 | 470 | 79.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 236 | 260 | 25.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 636 | 660 | 300.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 90 | 114 | 320.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 684 | 708 | 3.5 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 826 | 1022 | 31.679253 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 832 | 856 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 963 | 975 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_022017230.1 | receptor-like protein kinase HSL1 [Helianthus annuus] | 0 |
| G7JIK2 | Leucine-rich repeat receptor-like kinase protein SUNN OS=Medicago truncatula OX=3880 GN=SUNN PE=1 SV=2 | 0 | |
| TrEMBL | A0A5N6NVI6 | Protein kinase domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_17663 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah035061 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30022470 |
| Apiaceae | Apium graveolens | 1 | Ag8G00331 |
| Asteraceae | Flaveria trinervia | 1 | Ftri3G30941 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl01G0025 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_4_RagTag.1897 |