Basic Information
Locus ID:
Ftri3G30418
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
G-type lectin S-receptor-like serine threonine-protein kinase SD2-5
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 76893398 | 76895317 | - | Ftri3G30418 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.23 | 62,325.06 Da | 36.39 | 101.91 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 24 | 275 | 3.6E-31 | IPR001245 |
| SUPERFAMILY | SSF47473 | EF-hand | 288 | 383 | 7.02E-7 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 15 | 280 | 3.19E-56 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 100 | 1.8E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 102 | 294 | 7.5E-37 | - |
| SMART | SM00220 | serkin_6 | 22 | 279 | 5.4E-13 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 22 | 279 | 24.230635 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 315 | 350 | 8.822743 | IPR002048 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 148 | 160 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 28 | 53 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G59700.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_023752600.1 | probable serine/threonine-protein kinase PBL21 [Lactuca sativa] | 0 |
| Q9FN92 | Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana OX=3702 GN=At5g59700 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2J6M364 | Protein kinase domain-containing protein OS=Lactuca sativa OX=4236 GN=LSAT_8X75581 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 30 | Ftri11G25505, Ftri12G15517, Ftri14G01992, Ftri14G04619 ... |