Basic Information
Locus ID:
Ftri3G25762
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Src homology 3 domains
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 82059441 | 82064140 | - | Ftri3G25762 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.13 | 39,448.16 Da | 53.84 | 87.70 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 292 | 340 | 1.4E-12 | IPR001452 |
| SUPERFAMILY | SSF50044 | SH3-domain | 285 | 343 | 2.23E-17 | IPR036028 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 41 | 249 | 3.14E-22 | IPR027267 |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 39 | 251 | 1.8E-11 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 288 | 342 | 3.8E-17 | - |
| SMART | SM00326 | SH3_2 | 288 | 343 | 8.1E-16 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 285 | 344 | 21.304316 | IPR001452 |
| Coils | Coil | Coil | 184 | 204 | - | - |
| Coils | Coil | Coil | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G31440.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_021999174.1 | SH3 domain-containing protein 2 isoform X1 [Helianthus annuus] | 0 |
| Q9C865 | SH3 domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=SH3P1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6NR32 | SH3 domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_17178 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology