Basic Information
Locus ID:
Ftri3G24215
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Short Name:
NHX1
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 81790335 | 81794759 | + | Ftri3G24215 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.88 | 63,465.61 Da | 37.04 | 108.06 | 0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 24 | 422 | 3.4E-49 | IPR006153 |
| Gene3D | G3DSA:1.20.1530.20 | - | 16 | 425 | 2.4E-7 | IPR038770 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 30 | 5.0 | - |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 147 | 157 | 1.2E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 92 | 106 | 1.2E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 107 | 115 | 1.2E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 78 | 89 | 1.2E-11 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05030.1 | sodium hydrogen exchanger 2. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_021970016.1 | sodium/hydrogen exchanger 2 [Helianthus annuus] | 0 |
| Q9SXJ8 | Sodium/hydrogen exchanger 1 OS=Oryza sativa subsp. japonica OX=39947 GN=NHX1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A251UK21 | Sodium/hydrogen exchanger OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr06g0174161 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology