Basic Information
Locus ID:
Ftri3G15475
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 5665810 | 5669172 | - | Ftri3G15475 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.59 | 58,797.63 Da | 37.57 | 89.26 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01603 | Protein phosphatase 2A regulatory B subunit (B56 family) | 85 | 496 | 8.4E-181 | IPR002554 |
| SUPERFAMILY | SSF48371 | ARM repeat | 98 | 479 | 3.7E-150 | IPR016024 |
| Gene3D | G3DSA:1.25.10.10 | - | 93 | 494 | 1.1E-185 | IPR011989 |
| PIRSF | PIRSF028043 | PP2A_B56 | 1 | 511 | 1.1E-229 | IPR002554 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 72 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 72 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 28 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04113 (Meiosis - yeast)
map04113 (Meiosis - yeast)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G15415.1 | Protein phosphatase 2A regulatory B subunit family protein. B' regulatory subunit of PP2A (AtB'gamma) | 0 |
| RefSeq | XP_022036304.1 | serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform [Helianthus annuus] | 0 |
| Q8RW96 | Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform OS=Arabidopsis thaliana OX=3702 GN=B'GAMMA PE=1 SV=2 | 0 | |
| TrEMBL | A0A251V2P1 | Serine/threonine protein phosphatase 2A regulatory subunit OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr04g0126941 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology