Basic Information
Locus ID:
Ftri3G14162
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Short Name:
RPL18
Description:
60S ribosomal protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 88993846 | 88994920 | - | Ftri3G14162 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.40 | 17,181.88 Da | 44.95 | 80.79 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17135 | Ribosomal protein 60S L18 and 50S L18e | 9 | 151 | 1.8E-58 | IPR021131 |
| SUPERFAMILY | SSF52080 | Ribosomal proteins L15p and L18e | 8 | 93 | 2.62E-19 | IPR036227 |
| Gene3D | G3DSA:3.100.10.10 | - | 2 | 152 | 2.7E-65 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 116 | 152 | - | - |
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05590.1 | ribosomal protein L18. Encodes cytoplasmic ribosomal protein L18. | 0 |
| RefSeq | XP_021969053.1 | 60S ribosomal protein L18-3 [Helianthus annuus] | 0 |
| O65729 | Large ribosomal subunit protein eL18 (Fragment) OS=Cicer arietinum OX=3827 GN=RPL18 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6M4L0 | Ribosomal_L18e/L15P domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_36562 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology