Basic Information
Locus ID:
Ftri3G12877
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Nascent polypeptide-associated complex subunit alpha-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 78497682 | 78500145 | - | Ftri3G12877 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.32 | 21,418.49 Da | 49.72 | 75.79 | -0.69 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14358 | UBA_NAC_euk | 160 | 196 | 6.72527E-18 | - |
| Pfam | PF01849 | NAC domain | 59 | 114 | 1.9E-21 | IPR002715 |
| Pfam | PF19026 | HYPK UBA domain | 157 | 196 | 6.9E-13 | IPR044034 |
| Gene3D | G3DSA:1.10.8.10 | - | 158 | 195 | 3.4E-20 | - |
| Gene3D | G3DSA:2.20.70.30 | - | 65 | 118 | 5.8E-30 | IPR038187 |
| SMART | SM01407 | NAC_2 | 59 | 115 | 1.7E-24 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 56 | 121 | 17.712086 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 67 | - | - |
| Coils | Coil | Coil | 2 | 22 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12390.1 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 0 |
| RefSeq | XP_021833785.1 | nascent polypeptide-associated complex subunit alpha-like protein 1 [Prunus avium] | 0 |
| Q9LHG9 | Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6M3U1 | NAC-A/B domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_36271 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology