Basic Information
Locus ID:
Ftri3G12034
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Plastocyanin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 78607811 | 78608331 | - | Ftri3G12034 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.82 | 14,988.96 Da | 26.19 | 81.48 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 39 | 128 | 5.28587E-32 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 48 | 120 | 1.6E-18 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 46 | 128 | 7.4E-22 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 33 | 129 | 3.5E-23 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 33 | 130 | 27.40485 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021968850.1 | blue copper protein [Helianthus annuus] | 0 |
| TrEMBL | A0A251UI56 | Putative cupredoxin OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr06g0178001 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology