Basic Information
Locus ID:
Ftri3G02476
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 8006443 | 8007921 | + | Ftri3G02476 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 42,638.17 Da | 37.18 | 87.02 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02469 | Fasciclin domain | 196 | 324 | 4.1E-15 | IPR000782 |
| Pfam | PF02469 | Fasciclin domain | 34 | 114 | 1.2E-6 | IPR000782 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 190 | 324 | 1.96E-19 | IPR036378 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 29 | 174 | 8.76E-18 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 22 | 164 | 2.0E-10 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 165 | 325 | 8.6E-12 | IPR036378 |
| SMART | SM00554 | fasc_3 | 59 | 174 | 0.15 | IPR000782 |
| SMART | SM00554 | fasc_3 | 221 | 325 | 2.5E-18 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 183 | 322 | 13.366232 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 23 | 171 | 10.40523 | IPR000782 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 338 | 374 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G12730.1 | FASCICLIN-like arabinogalactan 2. AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cds | 0 |
| RefSeq | XP_022036261.1 | fasciclin-like arabinogalactan protein 2 [Helianthus annuus] | 0 |
| Q9SU13 | Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLA2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A251V2I5 | Putative FAS1 domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr04g0126431 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology