Basic Information
Locus ID:
Ftri2G24295
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Di-glucose binding within endoplasmic reticulum
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 13497481 | 13500387 | - | Ftri2G24295 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.32 | 63,040.75 Da | 34.78 | 98.46 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00168 | C2 domain | 425 | 519 | 1.1E-7 | IPR000008 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 30 | 288 | 6.4E-41 | IPR001245 |
| SUPERFAMILY | SSF49562 | C2 domain (Calcium/lipid-binding domain, CaLB) | 422 | 524 | 6.7E-12 | IPR035892 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 6 | 290 | 4.72E-70 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 104 | 300 | 5.6E-49 | - |
| Gene3D | G3DSA:2.60.40.150 | C2 domain | 425 | 536 | 1.4E-12 | IPR035892 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 102 | 1.0E-32 | - |
| SMART | SM00220 | serkin_6 | 24 | 295 | 3.4E-40 | IPR000719 |
| SMART | SM00239 | C2_3c | 424 | 519 | 4.5E-4 | IPR000008 |
| ProSiteProfiles | PS50004 | C2 domain profile. | 404 | 520 | 12.090593 | IPR000008 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 24 | 302 | 35.311691 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 146 | 158 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 30 | 55 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G39000.1 | Malectin/receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_021993900.1 | G-type lectin S-receptor-like serine/threonine-protein kinase B120 [Helianthus annuus] | 0 |
| Q9FID8 | Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana OX=3702 GN=At5g39000 PE=3 SV=1 | 0 | |
| TrEMBL | A0A251TCB4 | Putative C2 domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr11g0341221 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 30 | Ftri11G25505, Ftri12G15517, Ftri14G01992, Ftri14G04619 ... |