Basic Information
Locus ID:
Ftri2G16778
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 61223097 | 61226521 | + | Ftri2G16778 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.26 | 58,812.81 Da | 34.52 | 84.19 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 30 | 293 | 5.56627E-126 | - |
| Pfam | PF13499 | EF-hand domain pair | 342 | 401 | 1.6E-9 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 412 | 475 | 1.9E-15 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 30 | 294 | 3.4E-70 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 30 | 302 | 5.66E-79 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 322 | 501 | 2.66E-47 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 26 | 107 | 4.5E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 108 | 302 | 1.2E-56 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 303 | 477 | 3.1E-52 | - |
| SMART | SM00220 | serkin_6 | 22 | 294 | 1.3E-85 | IPR000719 |
| SMART | SM00054 | efh_1 | 413 | 441 | 0.0015 | IPR002048 |
| SMART | SM00054 | efh_1 | 377 | 405 | 0.0061 | IPR002048 |
| SMART | SM00054 | efh_1 | 341 | 369 | 4.3E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 449 | 477 | 1.8E-5 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 445 | 480 | 13.620752 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 22 | 294 | 45.912193 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 373 | 408 | 11.835447 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 337 | 372 | 12.895472 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 409 | 444 | 14.457615 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 458 | 470 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 350 | 362 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 142 | 154 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 386 | 398 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 422 | 434 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12480.1 | calmodulin-domain protein kinase 7. calmodulin-domain protein kinase CDPK isoform 7 (CPK7) | 0 |
| RefSeq | XP_023745998.1 | calcium-dependent protein kinase 7 [Lactuca sativa] | 0 |
| Q38873 | Calcium-dependent protein kinase 7 OS=Arabidopsis thaliana OX=3702 GN=CPK7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2J6JP49 | Calcium-dependent protein kinase OS=Lactuca sativa OX=4236 GN=LSAT_6X27140 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology