Basic Information
Locus ID:
Ftri2G13981
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Anaphase-promoting complex subunit 11 RING-H2 finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 9370118 | 9371716 | - | Ftri2G13981 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.70 | 25,833.19 Da | 47.60 | 85.80 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 118 | 161 | 6.69827E-17 | - |
| Pfam | PF13639 | Ring finger domain | 118 | 161 | 1.5E-11 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 99 | 165 | 1.59E-19 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 95 | 170 | 4.0E-20 | IPR013083 |
| SMART | SM00184 | ring_2 | 119 | 160 | 3.9E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 119 | 161 | 11.751628 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40250.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_022023234.1 | RING-H2 finger protein ATL46 [Helianthus annuus] | 0 |
| Q9FL07 | RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1 | 0 | |
| TrEMBL | A0A251RQB5 | Putative zinc finger, RING/FYVE/PHD-type OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr17g0535441 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology