Basic Information
Locus ID:
Ftri2G13306
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
proteinaceous RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 63136669 | 63140309 | - | Ftri2G13306 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.21 | 61,508.21 Da | 38.73 | 79.52 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16953 | Protein-only RNase P | 260 | 484 | 3.2E-60 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 8 | 211 | 4.4E-72 | IPR033443 |
| Gene3D | G3DSA:3.40.50.11980 | - | 275 | 450 | 2.2E-211 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 18 | 485 | 2.2E-211 | IPR011990 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 509 | 528 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 529 | 543 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 502 | 543 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16650.1 | proteinaceous RNase P 2. | 0 |
| RefSeq | XP_022025881.1 | proteinaceous RNase P 2 [Helianthus annuus] | 0 |
| Q680B9 | Proteinaceous RNase P 2 OS=Arabidopsis thaliana OX=3702 GN=PRORP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6NY59 | ribonuclease P OS=Mikania micrantha OX=192012 GN=E3N88_16329 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology