Basic Information
Locus ID:
Ftri2G04616
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Short Name:
CPK24
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 65290438 | 65294214 | - | Ftri2G04616 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.02 | 60,419.46 Da | 40.79 | 82.98 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 55 | 313 | 1.91981E-129 | - |
| CDD | cd00051 | EFh | 434 | 496 | 1.00444E-15 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 360 | 420 | 3.3E-8 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 56 | 314 | 4.2E-75 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 433 | 495 | 2.7E-11 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 345 | 497 | 5.2E-37 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 36 | 338 | 2.7E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 323 | 498 | 1.8E-45 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 58 | 141 | 5.7E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 142 | 322 | 3.3E-57 | - |
| SMART | SM00054 | efh_1 | 361 | 389 | 1.9E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 470 | 498 | 0.002 | IPR002048 |
| SMART | SM00220 | serkin_6 | 56 | 314 | 7.0E-97 | IPR000719 |
| SMART | SM00054 | efh_1 | 398 | 426 | 2.4 | IPR002048 |
| SMART | SM00054 | efh_1 | 434 | 462 | 3.1E-4 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 56 | 314 | 48.470444 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 394 | 429 | 8.487999 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 466 | 501 | 11.33333 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 362 | 392 | 13.704439 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 430 | 465 | 14.401823 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 407 | 419 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 176 | 188 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 443 | 455 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 370 | 382 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 479 | 491 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 16 | 34 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G31500.1 | calcium-dependent protein kinase 24. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_024985295.1 | calcium-dependent protein kinase 24-like [Cynara cardunculus var. scolymus] | 0 |
| Q9SIQ7 | Calcium-dependent protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=CPK24 PE=2 SV=1 | 0 | |
| TrEMBL | A0A251VIT1 | Putative EF-hand domain pair, Death-associated protein kinase 1 OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr02g0058041 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology