Basic Information
Locus ID:
Ftri2G01229
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Protein FAR1-RELATED SEQUENCE 5-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 1490787 | 1493552 | + | Ftri2G01229 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.14 | 77,558.25 Da | 35.98 | 80.62 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03101 | FAR1 DNA-binding domain | 98 | 190 | 1.1E-9 | IPR004330 |
| Pfam | PF10551 | MULE transposase domain | 289 | 364 | 1.3E-10 | IPR018289 |
| ProSiteProfiles | PS50966 | Zinc finger SWIM-type profile. | 513 | 549 | 8.147248 | IPR007527 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 629 | 673 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 645 | 673 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G76320.3 | - | 0 |
| RefSeq | XP_022019500.1 | protein FAR1-RELATED SEQUENCE 5-like [Helianthus annuus] | 0 |
| Q6NQJ7 | Protein FAR1-RELATED SEQUENCE 4 OS=Arabidopsis thaliana OX=3702 GN=FRS4 PE=2 SV=2 | 0 | |
| TrEMBL | A0A251SJ10 | Protein FAR1-RELATED SEQUENCE OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr14g0449641 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 44 | Ftri10G11617, Ftri10G29163, Ftri11G07361, Ftri11G18246 ... |