Basic Information
Locus ID:
Ftri2G00626
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 64791192 | 64794963 | - | Ftri2G00626 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.69 | 52,558.68 Da | 43.47 | 85.82 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 363 | 432 | 8.7E-19 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 27 | 347 | 2.1E-76 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 27 | 347 | 2.61E-77 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 357 | 453 | 3.0E-9 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 26 | 355 | 1.2E-109 | - |
| SMART | SM00768 | X8_cls | 361 | 446 | 3.7E-44 | IPR012946 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13560.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_022026478.1 | glucan endo-1,3-beta-glucosidase 4 [Helianthus annuus] | 0 |
| Q94CD8 | Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1 | 0 | |
| TrEMBL | A0A251VKE5 | Putative O-Glycosyl hydrolases family 17 protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr02g0056941 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology