Basic Information
Locus ID:
Ftri1G33518
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Cell division cycle 20.2, cofactor of APC complex-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 58043658 | 58045348 | - | Ftri1G33518 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.46 | 48,457.61 Da | 57.91 | 74.14 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 169 | 225 | 2.5E-6 | IPR024977 |
| Pfam | PF00400 | WD domain, G-beta repeat | 374 | 409 | 7.8E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 286 | 324 | 0.026 | IPR001680 |
| SUPERFAMILY | SSF50998 | Quinoprotein alcohol dehydrogenase-like | 125 | 411 | 7.53E-50 | IPR011047 |
| Gene3D | G3DSA:2.130.10.10 | - | 78 | 412 | 3.7E-109 | IPR015943 |
| SMART | SM00320 | WD40_4 | 282 | 324 | 2.3E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 161 | 200 | 0.0081 | IPR001680 |
| SMART | SM00320 | WD40_4 | 203 | 273 | 0.007 | IPR001680 |
| SMART | SM00320 | WD40_4 | 370 | 409 | 6.3E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 327 | 367 | 410.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 377 | 410 | 12.513543 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 168 | 209 | 11.109979 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 377 | 410 | 10.416506 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 396 | 410 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 85 | 114 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 90 | 104 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33270.1 | Transducin family protein / WD-40 repeat family protein. putative cdc20 protein (CDC20.1) | 0 |
| RefSeq | XP_021988223.1 | cell division cycle 20.2, cofactor of APC complex [Helianthus annuus] | 0 |
| Q9SZA4 | Cell division cycle 20.1, cofactor of APC complex OS=Arabidopsis thaliana OX=3702 GN=CDC20-1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251TI42 | Putative transducin family protein / WD-40 repeat family protein OS=Helianthus annuus OX=4232 GN=CDC20.1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology