Basic Information
Locus ID:
Ftri1G25536
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 9643953 | 9647926 | - | Ftri1G25536 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.00 | 66,072.57 Da | 50.08 | 80.98 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 132 | 394 | 4.6426E-132 | - |
| Pfam | PF00069 | Protein kinase domain | 133 | 395 | 7.3E-71 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 122 | 430 | 7.82E-84 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 427 | 577 | 1.71E-18 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 421 | 575 | 5.3E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 222 | 415 | 8.4E-60 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 416 | 505 | 5.3E-19 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 135 | 221 | 3.1E-22 | - |
| SMART | SM00220 | serkin_6 | 133 | 395 | 1.3E-100 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 133 | 395 | 51.565792 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 139 | 165 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 257 | 269 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 81 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 48 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50530.1 | CDPK-related kinase. CDPK-related kinase | 0 |
| RefSeq | XP_023743308.1 | CDPK-related kinase 5 [Lactuca sativa] | 0 |
| Q9SCS2 | CDPK-related kinase 5 OS=Arabidopsis thaliana OX=3702 GN=CRK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2J6JUM2 | Protein kinase domain-containing protein OS=Lactuca sativa OX=4236 GN=LSAT_4X167020 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology