Basic Information
Locus ID:
Ftri1G20815
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
DnaJ molecular chaperone homology domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 41598080 | 41599439 | - | Ftri1G20815 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.95 | 36,667.60 Da | 41.31 | 72.33 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 67 | 121 | 2.39586E-16 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 67 | 129 | 1.4E-18 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 60 | 131 | 1.27E-17 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 55 | 154 | 4.5E-19 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 66 | 124 | 2.7E-16 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 67 | 132 | 15.382295 | IPR001623 |
| ProSitePatterns | PS00636 | Nt-dnaJ domain signature. | 109 | 128 | - | IPR018253 |
| PRINTS | PR00625 | DnaJ domain signature | 104 | 124 | 4.9E-7 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 88 | 103 | 4.9E-7 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 69 | 87 | 4.9E-7 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 285 | 312 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 331 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01710.1 | Chaperone DnaJ-domain superfamily protein. | 0 |
| RefSeq | XP_021998577.1 | uncharacterized protein LOC110895562 [Helianthus annuus] | 0 |
| Q17438 | DnaJ homolog subfamily B member 1 OS=Caenorhabditis elegans OX=6239 GN=dnj-1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A103YCV7 | DnaJ domain-containing protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_014885 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology