Basic Information
Locus ID:
Ftri1G17656
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
WRKY transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 12079517 | 12082948 | - | Ftri1G17656 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.13 | 55,835.19 Da | 58.61 | 52.50 | -0.81 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 407 | 464 | 6.4E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 232 | 288 | 1.3E-23 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 230 | 290 | 8.11E-24 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 398 | 466 | 1.29E-28 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 217 | 291 | 2.4E-25 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 391 | 467 | 6.3E-34 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 406 | 465 | 9.8E-38 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 231 | 289 | 7.1E-32 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 226 | 290 | 20.942873 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 401 | 466 | 36.150429 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 476 | 499 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 8 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 445 | 512 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 323 | 359 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 284 | 386 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_022012682.1 | probable WRKY transcription factor 4 [Helianthus annuus] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5N6PQ10 | WRKY domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_06909 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology