Basic Information
Locus ID:
Ftri1G12649
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 7664150 | 7667074 | - | Ftri1G12649 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.55 | 43,899.53 Da | 47.43 | 94.21 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 182 | 358 | 1.1E-17 | IPR001245 |
| Pfam | PF13857 | Ankyrin repeats (many copies) | 37 | 88 | 4.6E-10 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 160 | 358 | 9.83E-30 | IPR011009 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 23 | 114 | 2.64E-21 | IPR036770 |
| Gene3D | G3DSA:1.25.40.20 | - | 16 | 106 | 2.5E-22 | IPR036770 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 118 | 363 | 6.0E-30 | - |
| SMART | SM00248 | ANK_2a | 83 | 115 | 2900.0 | IPR002110 |
| SMART | SM00248 | ANK_2a | 50 | 79 | 1.1E-6 | IPR002110 |
| PIRSF | PIRSF000654 | ILK | 8 | 383 | 2.4E-74 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 137 | 387 | 17.163635 | IPR000719 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 50 | 82 | 14.2386 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 50 | 82 | 12.858994 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G18950.2 | - | 0 |
| RefSeq | XP_024978397.1 | integrin-linked protein kinase 1-like [Cynara cardunculus var. scolymus] | 0 |
| Q93Z30 | Serine/threonine-protein kinase 12 OS=Arabidopsis thaliana OX=3702 GN=BHP PE=1 SV=1 | 0 | |
| TrEMBL | A0A2U1QNX1 | ATP synthase subunit beta OS=Artemisia annua OX=35608 GN=CTI12_AA002310 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 1 | Ag4G00547 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_01.2909.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri1G12649 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00029649, Pov_00029657 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_3_RagTag.720, evm.TU.Scaffold_3_RagTag.721 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-1240 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-13793 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-6407 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000019l.778 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00012750 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-5245 |
| Salicaceae | Populus euphratica | 1 | populus_peu24920 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132623793 |
| Solanaceae | Solanum chilense | 1 | SOLCI007409100 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107009611 |