Basic Information
Locus ID:
Ftri1G09744
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Has 114836 Blast hits to 56273 proteins in 1914 species Archae - 187
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 2366395 | 2370758 | + | Ftri1G09744 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.60 | 68,911.90 Da | 44.77 | 84.02 | -0.69 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 416 | 457 | 9.03E-7 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 68 | 245 | 3.7E-5 | IPR016024 |
| Gene3D | G3DSA:2.30.30.140 | - | 413 | 465 | 4.1E-12 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 560 | 610 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 331 | 348 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 477 | 537 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 316 | 330 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 592 | 610 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 477 | 492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 269 | 286 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 315 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 519 | 537 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 269 | 351 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80810.5 | - | 0 |
| RefSeq | XP_022015686.1 | uncharacterized protein LOC110915317 isoform X2 [Helianthus annuus] | 0 |
| A8MRD9 | Sister chromatid cohesion protein PDS5 homolog D OS=Arabidopsis thaliana OX=3702 GN=PDS5D PE=2 SV=3 | 0 | |
| TrEMBL | A0A5N6LX06 | Tudor domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_39521 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology