Basic Information
Locus ID:
Ftri1G09039
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
TMV resistance protein N-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 4977152 | 4978801 | + | Ftri1G09039 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.74 | 22,486.21 Da | 44.33 | 82.00 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01582 | TIR domain | 41 | 187 | 1.0E-20 | IPR000157 |
| SUPERFAMILY | SSF52200 | Toll/Interleukin receptor TIR domain | 35 | 172 | 3.53E-23 | IPR035897 |
| Gene3D | G3DSA:3.40.50.10140 | - | 38 | 199 | 3.9E-36 | IPR035897 |
| SMART | SM00255 | till_3 | 40 | 170 | 1.5E-25 | IPR000157 |
| ProSiteProfiles | PS50104 | TIR domain profile. | 39 | 196 | 19.13974 | IPR000157 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49140.1 | Disease resistance protein (TIR-NBS-LRR class) family. | 0 |
| RefSeq | XP_022017724.1 | putative receptor-like protein kinase At5g39000 [Helianthus annuus] | 0 |
| Q40392 | TMV resistance protein N OS=Nicotiana glutinosa OX=35889 GN=N PE=1 SV=1 | 0 | |
| TrEMBL | A0A251RWQ8 | Putative toll/interleukin-1 receptor homology (TIR) domain, Protein kinase-like domain protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr16g0502241 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 8 | Ftri1G03248, Ftri1G09039, Ftri1G17660, Ftri1G29281 ... |