Basic Information
Locus ID:
Ftri1G08574
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Short Name:
CPK30
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 4609800 | 4613309 | + | Ftri1G08574 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.79 | 59,338.76 Da | 38.53 | 83.21 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 50 | 316 | 5.6342E-129 | - |
| Pfam | PF13499 | EF-hand domain pair | 435 | 497 | 1.1E-14 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 363 | 424 | 1.3E-11 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 51 | 317 | 9.8E-70 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 341 | 508 | 9.81E-45 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 28 | 342 | 6.47E-82 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 52 | 137 | 9.6E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 138 | 328 | 2.1E-55 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 329 | 499 | 3.2E-54 | - |
| SMART | SM00220 | serkin_6 | 51 | 317 | 2.2E-90 | IPR000719 |
| SMART | SM00054 | efh_1 | 471 | 499 | 9.4E-8 | IPR002048 |
| SMART | SM00054 | efh_1 | 364 | 392 | 2.7E-7 | IPR002048 |
| SMART | SM00054 | efh_1 | 436 | 464 | 0.002 | IPR002048 |
| SMART | SM00054 | efh_1 | 400 | 428 | 0.12 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 360 | 395 | 16.019756 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 467 | 502 | 15.043417 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 396 | 431 | 9.799083 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 51 | 317 | 45.44577 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 432 | 466 | 12.867577 | IPR002048 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 171 | 183 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 480 | 492 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 57 | 80 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 373 | 385 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 409 | 421 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18890.1 | calcium-dependent protein kinase 1. encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro. | 0 |
| RefSeq | XP_035833797.1 | calcium-dependent protein kinase 30-like [Helianthus annuus] | 0 |
| Q9M9V8 | Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CPK10 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251RWN0 | Putative calcium-dependent protein kinase 1 OS=Helianthus annuus OX=4232 GN=ATCDPK1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology