Basic Information
Locus ID:
Ftri1G04038
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 14060553 | 14065846 | + | Ftri1G04038 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.44 | 69,788.68 Da | 45.78 | 88.19 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 48 | 134 | 4.2E-12 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 362 | 505 | 5.0E-30 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 170 | 247 | 7.4E-12 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 315 | 603 | 1.48E-67 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 167 | 250 | 1.2E-13 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 291 | 378 | 5.9E-11 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 37 | 137 | 3.5E-16 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 381 | 583 | 9.1E-61 | - |
| SMART | SM00220 | serkin_6 | 331 | 573 | 3.4E-13 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 281 | 591 | 25.997385 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 151 | 250 | 15.23966 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 33 | 137 | 15.809942 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 426 | 438 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40380.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 42. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_022012671.1 | cysteine-rich receptor-like protein kinase 42 [Helianthus annuus] | 0 |
| Q9FNE1 | Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana OX=3702 GN=CRK42 PE=2 SV=1 | 0 | |
| TrEMBL | A0A251SAH0 | Putative serine/threonine/dual specificity protein kinase, catalytic domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr15g0487671 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology