Basic Information
Locus ID:
Ftri1G03248
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Di-glucose binding within endoplasmic reticulum
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 4859954 | 4861649 | + | Ftri1G03248 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.65 | 52,817.77 Da | 40.19 | 88.49 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01582 | TIR domain | 305 | 451 | 2.0E-20 | IPR000157 |
| Pfam | PF00069 | Protein kinase domain | 22 | 287 | 8.6E-47 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 8 | 316 | 3.64E-71 | IPR011009 |
| SUPERFAMILY | SSF52200 | Toll/Interleukin receptor TIR domain | 299 | 436 | 1.57E-22 | IPR035897 |
| Gene3D | G3DSA:3.40.50.10140 | - | 303 | 463 | 2.6E-35 | IPR035897 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 98 | 300 | 5.0E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 95 | 1.8E-30 | - |
| SMART | SM00220 | serkin_6 | 21 | 294 | 8.3E-30 | IPR000719 |
| SMART | SM00255 | till_3 | 304 | 434 | 2.0E-25 | IPR000157 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 21 | 294 | 37.643803 | IPR000719 |
| ProSiteProfiles | PS50104 | TIR domain profile. | 303 | 460 | 19.526596 | IPR000157 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 140 | 152 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 27 | 49 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G39000.1 | Malectin/receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_022017724.1 | putative receptor-like protein kinase At5g39000 [Helianthus annuus] | 0 |
| Q9FID8 | Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana OX=3702 GN=At5g39000 PE=3 SV=1 | 0 | |
| TrEMBL | A0A251RWQ8 | Putative toll/interleukin-1 receptor homology (TIR) domain, Protein kinase-like domain protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr16g0502241 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 8 | Ftri1G03248, Ftri1G09039, Ftri1G17660, Ftri1G29281 ... |