Basic Information
Locus ID:
Ftri18G30644
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
CSC1-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 95216405 | 95221362 | + | Ftri18G30644 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.93 | 80,804.68 Da | 46.49 | 107.35 | 0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02714 | Calcium-dependent channel, 7TM region, putative phosphate | 357 | 621 | 8.4E-73 | IPR003864 |
| Pfam | PF14703 | Cytosolic domain of 10TM putative phosphate transporter | 188 | 343 | 1.1E-36 | IPR027815 |
| Pfam | PF13967 | Late exocytosis, associated with Golgi transport | 6 | 165 | 3.5E-36 | IPR032880 |
| Coils | Coil | Coil | 275 | 295 | - | - |
| Coils | Coil | Coil | 232 | 252 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01100.1 | hypothetical protein 1. unknown protein, has cDNAs and ESTs associated to it | 0 |
| RefSeq | XP_021983230.1 | CSC1-like protein HYP1 [Helianthus annuus] | 0 |
| Q8GUH7 | CSC1-like protein HYP1 OS=Arabidopsis thaliana OX=3702 GN=HYP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6L7M4 | AP2/ERF domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_45962 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology