Basic Information
Locus ID:
Ftri18G30523
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Hippocampus abundant transcript-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 1979631 | 1986387 | + | Ftri18G30523 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.00 | 48,074.11 Da | 38.68 | 117.06 | 0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 24 | 418 | 3.19823E-59 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 60 | 379 | 2.1E-22 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 58 | 417 | 7.72E-38 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 22 | 420 | 6.3E-37 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 17 | 425 | 11.547635 | IPR020846 |
| ProSitePatterns | PS00216 | Sugar transport proteins signature 1. | 75 | 91 | - | IPR005829 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 363 | 386 | 2.4E-6 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 88 | 112 | 2.4E-6 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 303 | 324 | 2.4E-6 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 57 | 76 | 2.4E-6 | IPR001958 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_022038348.1 | hippocampus abundant transcript-like protein 1 [Helianthus annuus] | 0 |
| Q5SR56 | Hippocampus abundant transcript-like protein 1 OS=Homo sapiens OX=9606 GN=MFSD14B PE=1 SV=3 | 0 | |
| TrEMBL | A0A251USS9 | Putative major facilitator superfamily domain protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr05g0146901 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology